Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015849348.1_cds_XP_016510759.1_23564
CDS Infomation

[gene=LOC107828022] [db_xref=GeneID:107828022] [protein=V-type proton ATPase subunit H-like] [protein_id=XP_016510759.1] [location=join(9761..9796,11883..12008,12496..12598,12671..12743,13658..13723,13830..13955,15092..15254,15435..15560,15700..15825,16180..16359,17155..17403)] [gbkey=CDS]
Sequence

ATGCCAATGGAGAATGCTGAGCTTACTACAGAGCAGGTTTTGAGCAGGGATATCCCATGG
GAGACATACATGGCCACAAAGCTGATCACAGGAACAGATTTTCAGCTGTTGAGACGCTAT
GACAAAAAGGCAGAAAGTTACAAAGCCCAGTTGTTGGATGATGACGGTCGAGGTTATGTC
CGCGTCTTTGTTACCATATTACATGACGTCTTCAAGGAAGAAACCGTGGAGTATGTTTTG
GCTTTGATTGATGAAATGCTTACAGCTAACCCGAAAAGAGCAAGACTATTCCATGATAAC
AGTCTTGAAGATGAAGATACCTATGAGCCTTTCCTCAGATTGCTCTGGAAAGGTAATTGG
TTCATACAAGAGAAGAGCTGTAAGATTCTGTCTTTGATAGTGAGTGCCAGGCCAAAAGTT
CAGAATGGTGTTGATGCTAATGGAGACGCGTCAGGTTCAAAGAAGAAACTCACTACCATC
GAAGATGTTCTGACCGGCCTGGTTGATTGGCTTTGTGCACAGGTTTGTGTGGGAAAGAAG
CTTTTTGGAGTTTTAGTTTCTTTTTTGGGGGCCAGGGGGGNCCTAGCAACTCTGTTGAAG
GAGCCAGTGATTCGATCTTCATTTGTTCGAGCCGATGGAGTGAAGTTGCTTGTTCCTTTA
ATTACACCAGCATCAACGCAGCAGTCTATCCAGCTTCTCTACGAGACATGTCTATGTGTC
TGGCTATTGTCTTACTATGAACCTGCAATAGAGTACTTAGCTACTTCAAGGGCGCTCCCT
CGATTGATAGAAGTTGTTAAAGGTTCAACAAAGGAGAAGGTCGTACGGGTCGTCATCTTG
ACTCTTCGGAATTTGCTTTCCAAAGGATCATTTAGTATTCTGATGGTAGACTTGGGAGTG
CTGCAGATTGTTCAGAGCTTGAAAGCGCAGGCTTGGAGTGATGAGGATCTTTTGGATGCT
CTGAATCAACTAGAAGAAGGATTGAAGGATAACATCAAAAAGCTGAGTTCGTTTGATAAG
TACAAGCAAGAAGTCCTTCTAGGCCATCTTGATTGGTCTCCGATGCACAAAGATCCTATA
TTCTGGCGCGAAAACATAAATAGTTTTGAGGAGAATGATTTCCAGATCCTGAGGGTGCTC
ATTACAATTTTGGACACATCAAGTGATCCAAGGACACTTGCTGTTGCTTGCTATGATCTA
TCACAGTTCATTCAGTGCCATTCTGCTGGGCGAATCATAGTGAATGACCTCAAAGCTAAG
GAGCGCGTAATGAAACTGTTGAACCACGAGAATGCAGAGGTCACAAAAAATGCCTTACTC
TGTATCCAAAGGCTTTTCCTAGGTGCCAAGTATGCTAGCTTTTTGCAGGTTTAA

Peptide Sequence

PEP ID

XP_016510759.1
PEP Infomation

PREDICTED: V-type proton ATPase subunit H-like [Nicotiana tabacum]
Sequence

MPMENAELTTEQVLSRDIPWETYMATKLITGTDFQLLRRYDKKAESYKAQLLDDDGRGYV
RVFVTILHDVFKEETVEYVLALIDEMLTANPKRARLFHDNSLEDEDTYEPFLRLLWKGNW
FIQEKSCKILSLIVSARPKVQNGVDANGDASGSKKKLTTIEDVLTGLVDWLCAQVCVGKK
LFGVLVSFLGARGXLATLLKEPVIRSSFVRADGVKLLVPLITPASTQQSIQLLYETCLCV
WLLSYYEPAIEYLATSRALPRLIEVVKGSTKEKVVRVVILTLRNLLSKGSFSILMVDLGV
LQIVQSLKAQAWSDEDLLDALNQLEEGLKDNIKKLSSFDKYKQEVLLGHLDWSPMHKDPI
FWRENINSFEENDFQILRVLITILDTSSDPRTLAVACYDLSQFIQCHSAGRIIVNDLKAK
ERVMKLLNHENAEVTKNALLCIQRLFLGAKYASFLQV

Transcript Sequence

Gene sequence data has not been registered.